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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915788.1_cds_XP_016465533.1_58479
CDS Infomation

[gene=LOC107788371] [db_xref=GeneID:107788371] [protein=short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2] [protein_id=XP_016465533.1] [location=join(11522..11709,11798..11877,12156..12309,12426..12504,12682..12766,12855..12901,13683..13856)] [gbkey=CDS]
Sequence

ATGAGGAATGTCCATGTGGTTATTGCAGCAAGAAATATGGAGGCTGCAGATGAAGCAAAA
CAGCGTATTCTCAAGGACAATAATGCTGCTCGCGTTGATATTGAGAAACTTGACCTGAGT
TCAATTAGATCTGTCAAGGCATTTGCTGATAATTTCAAAGCACTTAACCTTCCTCTCAAC
ATCTTAATTAACAATGCAGGTATTATGTTTTGTCCATTTCAGCTTTCCGGAGATGGCATA
GAGATGCAATTCGCCACAAATCATCTAGGTCACTTCTACTTGACTAATCTTCTTCTAGAC
AAAATGAAGGAAACAGCAAAAGCTAGTGGTATTCAGGGTAGGATTGTGAACTTGTCATCA
GTAGCTCACCTTTGCCCATATAAAGAAGGAATAAGATTTCACAAGATCAATAACAAGAGA
AGTTATCAAGACAAACTAGCATACGGGCAATCCAAATTAGCCAATATATTACATGCCAAT
GAACTTTCTCGCCGCTTGCAGGAAGAAGAAGCAAATATAACTGTCAACTCAGTGCATCCA
GGTTTAATAATGACAAACCTCATGAGGCATTCTGCTCTTTTGATGAGAATTTTAAGGGCT
TTCACTTGTTTCCTGTGGAAGAATGTTCCTCAGGGAGCAGCTACAACATGCTATGTTGCC
CTCCATCCAAGACTGAAGGGGGTGACAGGAAAGTACTTCCATGACTGCAACGAGTACAAG
CCAAGCAAGCTAGCACGAGACGAAGCTTTAGCACGTAACCTTTGGGATTTCAGCAACAAC
TTGGTTAATGCAACTCTAAAGACTTGA

Peptide Sequence

PEP ID

XP_016465533.1
PEP Infomation

PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MRNVHVVIAARNMEAADEAKQRILKDNNAARVDIEKLDLSSIRSVKAFADNFKALNLPLN
ILINNAGIMFCPFQLSGDGIEMQFATNHLGHFYLTNLLLDKMKETAKASGIQGRIVNLSS
VAHLCPYKEGIRFHKINNKRSYQDKLAYGQSKLANILHANELSRRLQEEEANITVNSVHP
GLIMTNLMRHSALLMRILRAFTCFLWKNVPQGAATTCYVALHPRLKGVTGKYFHDCNEYK
PSKLARDEALARNLWDFSNNLVNATLKT

Transcript Sequence

Gene sequence data has not been registered.